Cti-MIR160b

Basic info.

• miRNA locus ID
• Cti-MIR160b

• miRNA locus accession
• PmiREN003284

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01300130.1  6016  6138  -

• Comments
• A member of family MIR160

• Confidence level
• 

Secondary strurture and sequence

 AC   -     -   AAGT      C       C            T A   C    C  TA
   ACG ATGAG TGT    ATATGC TGGCTCC TGTATGCCATTT C GAG CCAT GG  
   ||| ||||| |||    |||||| ||||||| |||||||||||| | ||| |||| ||  T
   TGC TGTTC ACA    TATACG ACCGAGG GTATGCGGTAGG G CTC GGTA CC  
TCT   A     T   -CCT      A       A            T C   C    A  TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]