Cti-MIR162a

Basic info.

• miRNA locus ID
• Cti-MIR162a

• miRNA locus accession
• PmiREN003286

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01304413.1  2849  2980  -

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

       --TTT      GTT       GT   C    C       A        AACAAACATA GAAC
   TGCG     GGTGGA   CATTGGA  CAG GGTT ATCGATC GTTCCTCT          C    
   ||||     ||||||   |||||||  ||| |||| ||||||| ||||||||          |     
   GTGC     CCACCT   GTGACCT  GTC CCAA TAGCTAG TAAGGAGA          G    
TCC    CGTCC      ---       AC   T    A       C        GAGAAAGAGG GGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]