Cti-MIR162b

Basic info.

• miRNA locus ID
• Cti-MIR162b

• miRNA locus accession
• PmiREN003287

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01462186.1  2245  2403  -

• Comments
• A member of family MIR162

• Confidence level
• 

Secondary strurture and sequence

     -T       A   GT            C    C       T     ---  AAA CCGATGAATGATTGAAAAAAAATAT
   TG  GTTTGGT GAG  CGCTGGATGCAG GGTT ATCGATC GTTCC   CC   T                         
   ||  ||||||| |||  |||||||||||| |||| ||||||| |||||   ||   |                         A
   AC  CAAACCG CTC  GCGACCTACGTC CCAA TAGCTAG TAAGG   TA   G                         
TTT  CT       A   --            T    A       C     AAA  --- GATAGCTAGAGGGAGAGGAAGAAGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]