Cti-MIR164a

Basic info.

• miRNA locus ID
• Cti-MIR164a

• miRNA locus accession
• PmiREN003288

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01304419.1  693  892  +

• Comments
• A member of family MIR164

• Confidence level
• 

Secondary strurture and sequence

 AG     --      AG        A    CA         TAA           ----------    ATGTTGTAGACCACAAGGGTAAGGGCTCATGTTCCAA
   AAGGT  GGGTGG  CAAGATGG GAAG  GGGCACGTG   TACTAACTCAT          GCAA                                     
   |||||  ||||||  |||||||| ||||  |||||||||   |||||||||||          ||||                                      
   TTCCA  CCTACC  GTTCTACC CTTC  CCCGTGTAC   GTGGTTGAGTA          GTTT                                     
TAA     TA      -A        C    TA         TTC           AATGGCTTGG    GGGACCCGAGCTCTAGTGATCGGGTCCCAAACTTGGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]