Cti-MIR169d

Basic info.

• miRNA locus ID
• Cti-MIR169d

• miRNA locus accession
• PmiREN003308

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01094534.1  7458  7585  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  A      T        CT G          -     T   AA   --    TT       GTAGC
   GAATAG AGTCTTTT  G TAGCCAAGGA TGACT GCC  ATC  CCGA  CAAGGTG     
   |||||| ||||||||  | |||||||||| ||||| |||  |||  ||||  |||||||     A
   TTTATT TCGGAAAG  C ATCGGTTCCT ACTGA CGG  TAG  GGTT  GTTCCGC     
CTC      C        TT A          C     -   AC   TT    -T       AACAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]