Cti-MIR169e

Basic info.

• miRNA locus ID
• Cti-MIR169e

• miRNA locus accession
• PmiREN003309

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01094534.1  11764  11892  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

      --T  T        CT   -     A   -     T   AC   --    TT       G  GC
  AGAA   AG AGTCTTTT  GGT AGCCA GGA TGACT GCC  ATC  CCAA  CAAGGCG TG  
  ||||   || ||||||||  ||| ||||| ||| ||||| |||  |||  ||||  ||||||| ||  A
  TCTT   TC TCGGAAAG  CCA TCGGT CCT ACTGA CGG  TAG  GGTT  GTTCCGC AC  
AC    TCT  -        -T   A     G   C     -   AC   TT    -T       A  TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]