Cti-MIR169k

Basic info.

• miRNA locus ID
• Cti-MIR169k

• miRNA locus accession
• PmiREN003315

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01099248.1  1209  1336  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

     -T  C        CT G          -     T   AC   --    TT       GTAGC
 AGAA  AG AGTCTTTT  G TAGCCAAGGA TGACT GCC  ATC  CCAA  CAAGGCG     
 ||||  || ||||||||  | |||||||||| ||||| |||  |||  ||||  |||||||     A
 TCTT  TC TCGGAAAG  C ATCGGTTCCT ACTGA CGG  TAG  GGTT  GTTCCGC     
C    TC  C        TT A          T     -   AC   TT    -T       AACAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]