Cti-MIR169p

Basic info.

• miRNA locus ID
• Cti-MIR169p

• miRNA locus accession
• PmiREN003320

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01255108.1  5569  5697  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

      --T  C  T      T   -         -     T   --ACAT     TT       GTAGC
  AGAA   AG AG CTTTTC GGT AGCCAAGGA TGACT GCC      GCCAA  CAAGGCG     
  ||||   || || |||||| ||| ||||||||| ||||| |||      |||||  |||||||     A
  TCTT   TC TC GAAAAG TCA TCGGTTCCT ACTGA CGG      TGGTT  GTTCCGC     
AC    TCT  -  -      T   A         C     -   ACTATT     -T       AATAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]