Cti-MIR169q

Basic info.

• miRNA locus ID
• Cti-MIR169q

• miRNA locus accession
• PmiREN003321

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01300483.1  748  876  +

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

      T     -TC     T   -         -     T   AC  --C    TT   T   GTAGC
  AGAA AGAAG   TTTTC GGT AGCCAAGGA TGACT GCC  AT   CCAA  CAA GCG     
  |||| |||||   ||||| ||| ||||||||| ||||| |||  ||   ||||  ||| |||     A
  TCTT TCTTC   GAAAG TCA TCGGTTCCT ACTGA CGG  TA   GGTT  GTT CGC     
AC    -     TCC     T   A         C     -   AC  TTT    -T   C   AACAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]