Cti-MIR172e

Basic info.

• miRNA locus ID
• Cti-MIR172e

• miRNA locus accession
• PmiREN003333

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01258195.1  2148  2244  -

• Comments
• A member of family MIR172

• Confidence level
• 

Secondary strurture and sequence

AAA     --   C  A C           T         A   -A  TC
   TGTCA  TTG TT C GATGCGGCATC TCAAGATTC CAT  CC  
   |||||  ||| || | ||||||||||| ||||||||| |||  ||   
   ACAGT  AAC AA G CTACGTCGTAG AGTTCTAAG GTA  GG  
ACA     TA   T  A T           T         A   AA  GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]