Cti-MIR172f

Basic info.

• miRNA locus ID
• Cti-MIR172f

• miRNA locus accession
• PmiREN003334

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01288689.1  1613  1724  -

• Comments
• A member of family MIR172

• Confidence level
• 

Secondary strurture and sequence

   TC       GTT  -    C                  A   --G     T  AAA
  T  AGCCGTT   TT CCGG GTGGCATCATCAAGATTC CGT   CAAAA GC   
  |  |||||||   || |||| |||||||||||||||||| |||   ||||| ||    
  A  TCGGCAA   AA GGCT CGTCGTAGTAGTTCTAAG GTA   GTTTT CG   
AC -T       AAT  C    A                  A   GGA     C  AAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]