Cti-MIR393b

Basic info.

• miRNA locus ID
• Cti-MIR393b

• miRNA locus accession
• PmiREN003342

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01246079.1  1021  1126  -

• Comments
• A member of family MIR393

• Confidence level
• 

Secondary strurture and sequence

     TT  A   C      AC            C    T          CAATT
   GA  GC ACT AAGGAG  ATCCAAAGGGAT GCAT GATCCCAAAT     
   ||  || ||| ||||||  |||||||||||| |||| ||||||||||     G
   CT  CG TGG TTCCTC  TAGGTTTTCCTA CGTA CTAGGGTTTA     
AAG  -T  A   C      CT            T    -          CTATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]