Cti-MIR394b

Basic info.

• miRNA locus ID
• Cti-MIR394b

• miRNA locus accession
• PmiREN003345

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01460485.1  1123  1234  +

• Comments
• A member of family MIR394

• Confidence level
• 

Secondary strurture and sequence

    CAT GA        C         TT   T        ATACGTAT   -     AT
  AG   A  TACAGAGC AGTTTGGCA  CTG CCACCTCC        TTG TGATG  
  ||   |  |||||||| |||||||||  ||| ||||||||        ||| |||||  T
  TT   T  ATGTCTCG TTAAATCGT  GAC GGTGGAGG        AAC ATTGC  
AC  CTT GA        A         CC   C        --------   G     CA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]