Cti-MIR399a

Basic info.

• miRNA locus ID
• Cti-MIR399a

• miRNA locus accession
• PmiREN003356

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01184375.1  8144  8265  -

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

 TG      T  -  C   A A        T         A    CCCCC    GGTT  AAT
   GTGCAT TG TG ATT C GGGTAAGT CTCCTTTGG AGCT     GCTT    GC   
   |||||| || || ||| | |||||||| ||||||||| ||||     ||||    ||    
   CATGTA AC AC TAA G CCCGTTTA GAGGAAACC TTGA     TGAG    CG   
TTA      T  T  T   C A        -         G    -TGTT    ATCT  CAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]