Cti-MIR399d

Basic info.

• miRNA locus ID
• Cti-MIR399d

• miRNA locus accession
• PmiREN003359

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01392727.1  23  144  -

• Comments
• A member of family MIR399

• Confidence level
• 

Secondary strurture and sequence

    A     T  -  C   A A        T         A    C CC     - TT  AAT
  TG TGCAT TG TG ATT C GGGTAAGT CTCCTTTGG AGCT C  ACTTG G  GC   
  || ||||| || || ||| | |||||||| ||||||||| |||| |  ||||| |  ||    
  AC ATGTA AC AC TAA G CCCGTTTA GAGGAAACC TCGA G  TGAGC C  CG   
TT  -     T  T  T   C A        -         G    T TT     T CT  CAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]