Cti-MIR6108a

Basic info.

• miRNA locus ID
• Cti-MIR6108a

• miRNA locus accession
• PmiREN003363

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01194136.1  10644  10852  +

• Comments
• A member of family MIR6108

• Confidence level
• 

Secondary strurture and sequence

CCG  A   A   T     TC        A            CTCC         TCAATCCTAATAGAAGATCAATTGAAAATACCCTTCTAAGCCAGTTCATG
   GT AGA TAG AGTTA  GTGAGAAG GTAAGAAGGGAT    ATCCTTGGA                                                  
   || ||| ||| |||||  |||||||| ||||||||||||    |||||||||                                                  G
   CA TCT ATC TCAAT  CACTCTTC CATTCTTCCCTA    TGGGAACTA                                                  
  A  C   A   C     TC        A            AACC         GTGAAAATTAATCACCACTAGATTACCAAGTCGAATTCAGGTTTTTATTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]