Cti-MIR6108c

Basic info.

• miRNA locus ID
• Cti-MIR6108c

• miRNA locus accession
• PmiREN003365

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01250870.1  8613  8830  -

• Comments
• A member of family MIR6108

• Confidence level
• 

Secondary strurture and sequence

   TA      TAGCATA    -A       TTA         TATTTC        ----AAAG T     -  GTAAAAAGCTGTGCGGCGGCGCCTCTCTAGGTATGGTTG
 GG  TGATCC       TAGA  CTTTCTT   TTTTTTATT      ACTCAAGC        G CATGG TT                                       
 ||  ||||||       ||||  |||||||   |||||||||      ||||||||        | ||||| ||                                       G
 CC  ACTAGG       GTCT  GGAAGAA   GAAGAGTGG      TGGGTTTG        C TGCCG CG                                       
T  TA      TTTCCAG    AG       TGA         ---CTT        GAGTATTT -     G  GAGTAATGGCCGATTCGGGAGCGGCGGTTCCGCATGTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]