Cti-MIRN521

Basic info.

• miRNA locus ID
• Cti-MIRN521

• miRNA locus accession
• PmiREN003373

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01287883.1  7968  8144  -

• Comments
• A member of family MIRN521

• Confidence level
• 

Secondary strurture and sequence

            ACGA  C         A  A            G       A    TC    ----GATC      TCTCAACCTGATGCC
  TTCTTCCACA    GT TGATCCAGT GT TCATCAGTGAGG TTTCTGA GGTG  AAAT        TAGGTT               
  ||||||||||    || ||||||||| || |||||||||||| ||||||| ||||  ||||        ||||||               A
  AAGAAGGTGT    CA ACTAGGTCA CA AGTAGTCACTCC AAAGATT CTAC  TTTG        ATGGTA               
AG          CACA  A         C  G            -       C    -T    TAACAATA      ACGACAATACTTTCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]