Cti-MIRN523

Basic info.

• miRNA locus ID
• Cti-MIRN523

• miRNA locus accession
• PmiREN003376

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01123506.1  3580  3765  -

• Comments
• A member of family MIRN523

• Confidence level
• 

Secondary strurture and sequence

   CAA            C  C            C      TGC    GCCAG        AAA  AA   ---              ATAAA    CAA
  T   CTACATCAGGGT TG TTGATGTGGCAT GGAATT   CATC     TAACCTTC   GG  GTA   CCATAGGAAGTGGG     GCTT   
  |   |||||||||||| || |||||||||||| ||||||   ||||     ||||||||   ||  |||   ||||||||||||||     ||||    
  A   GATGTGGTCCCA AC AACTACATCGTA CCTTAA   GTAG     ATTGGAAG   CT  CAT   GGTATCCTTCACCC     CGAA   
GT ATC            A  A            A      --T    ---AA        ---  GG   GAA              -ACAC    ACC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]