Cti-MIRN524

Basic info.

• miRNA locus ID
• Cti-MIRN524

• miRNA locus accession
• PmiREN003377

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01296802.1  1189  1329  -

• Comments
• A member of family MIRN524

• Confidence level
• 

Secondary strurture and sequence

    T       TG     C   C       -CAA          --   TGA   -T      A      TA
  TA CAAGGCA  GATTG TTG TCTCCCT    GGGCTTCTAG  AAG   CCA  GCATGC TTGCAA  
  || |||||||  ||||| ||| |||||||    ||||||||||  |||   |||  |||||| ||||||  C
  AT GTTCTGT  CTAGT AAC AGAGGGA    TTCGAAGATC  TTC   GGT  TGTACG AATGTT  
TT  T       TA     A   A       ATTG          GT   TGA   TT      A      TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]