Cti-MIRN526a

Basic info.

• miRNA locus ID
• Cti-MIRN526a

• miRNA locus accession
• PmiREN003379

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01298717.1  11354  11565  -

• Comments
• A member of family MIRN526

• Confidence level
• 

Secondary strurture and sequence

     A           T AA              T    A            A    TT     --    TGG  -  GATCAGGGATGATTGACGTGATTCATGGGAGG
  CAT CGAGAAGCATA C  TTTAAGAGAACGTG GGAC AATTTCAGCCAC CATC  CGGTT  ATGA   AC GT                                
  ||| ||||||||||| |  |||||||||||||| |||| |||||||||||| ||||  |||||  ||||   || ||                                 
  GTA GCTCTTTGTAT G  AAATTCTCTTGCAC CTTG TTAGAGTTGGTG GTAG  GCCAG  ATTT   CC CC                                
AA   C           T AA              T    C            A    --     TT    ---  G  GAAACTAGCCAGGGGGGAAATTATTAGAGATG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]