Cti-MIRN531

Basic info.

• miRNA locus ID
• Cti-MIRN531

• miRNA locus accession
• PmiREN003386

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01462702.1  1846  2035  -

• Comments
• A member of family MIRN531

• Confidence level
• 

Secondary strurture and sequence

 GT      -T A      A         T            ATGG  G    T     C       C     CCAACCCATGAATTGCGCCTTTA
   GTGAGA  G GAGTTA GGTGAGAAA GTAAGAAGGGAT    AC CTTG GATCA TTTTAAT TCATG                       
   ||||||  | |||||| ||||||||| ||||||||||||    || |||| ||||| ||||||| |||||                       G
   TACTCT  C TTCAAT CCACTCTTT CATTCTTCCTTA    TG GAAC CTAGT AGGATTA CTTCT                       
GGT      TC C      G         C            GAGG  G    -     T       A     AGTTGTGATTATAGTTAAGGGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]