Cti-MIRN545

Basic info.

• miRNA locus ID
• Cti-MIRN545

• miRNA locus accession
• PmiREN003402

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01277257.1  454  617  -

• Comments
• A member of family MIRN545

• Confidence level
• 

Secondary strurture and sequence

         C                                  C      C  T  C       A  C     ACTT  AAA
  GTTTTAC AACTCGGTCATTATCATGACGTCAGACATTGGGG TTGTCA AT CT GAGATGC TC ATGTC    CC   
  ||||||| |||||||||||||||||||||||||||||||||| |||||| || || ||||||| || |||||    ||    
  CAAAATG TTGAGCCAGTAATAGTACTGCAGTTTGTAACCCC AACAGT TA GA CTCTACG AG TACAG    GG   
AT       A                                  A      T  T  C       A  T     GTGT  AAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]