Cti-MIRN551

Basic info.

• miRNA locus ID
• Cti-MIRN551

• miRNA locus accession
• PmiREN003412

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01037929.1  1896  2086  -

• Comments
• A member of family MIRN551

• Confidence level
• 

Secondary strurture and sequence

                 C  C          -                            CA  ---------------    ATA G     -    A   CGGA
  AAGTAGAGAAGTGAT TC ACCACTCATC CGGTCAATAAAGGAGGCTTTGATCGGTC  CC               ACTC   C GTGGA CGTG TCA    
  ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||  ||               ||||   | ||||| |||| |||     
  TTCATCTCTTCACTA AG TGGTGAGTAG GTCAGTTGTTTCCTCCGAAACTGGCCAG  GG               TGGG   G TACTT GCGC AGT    
GC               A  T          A                            AG  GGAAATTATTAGAGA    -AG G     A    -   TAGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]