Cti-MIRN561

Basic info.

• miRNA locus ID
• Cti-MIRN561

• miRNA locus accession
• PmiREN003425

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01279757.1  3591  3761  +

• Comments
• A member of family MIRN561

• Confidence level
• 

Secondary strurture and sequence

   A       C  AC       C G                          T   G --  -  GATCGAATTTGCAGAAGGAAGTT
  G ATTCGAT GA  GTCTATC G GTGTTTTCGAGTTAACGGAATACATG ATC G  GT TC                       
  | ||||||| ||  ||||||| | |||||||||||||||||||||||||| ||| |  || ||                        
  T TAAGCTA CT  CAGATAG C CACAAAAGCTCAATTGTCTTATGTAC TAG C  AC GT                       
AG C       A  GC       A G                          C   G AT  A  GTTCAAACTTATGCGCACAGCAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]