Cti-MIRN565

Basic info.

• miRNA locus ID
• Cti-MIRN565

• miRNA locus accession
• PmiREN003430

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01305344.1  2437  2643  -

• Comments
• A member of family MIRN565

• Confidence level
• 

Secondary strurture and sequence

                       A    A                       -                   A      C               -CG   - AAA
  AATATGTTTTTAAGACCATGG TTTA CCACTGTTATATTCATCGATAAA CAATTATGTCGTCGATATG AGAAAC GGAACGAAGTTATAC   TCT C   
  ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||   ||| |    
  TTATACAGAAATTCTGGTACC AAGT GGTGACAATATAAGTAGCTATTT GTTAATACAGCAGCTATAC TCTTTG CTTTGCTTCAATATG   AGA G   
AG                     C    C                       T                   C      A               ATA   A CTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]