Cti-MIRN570

Basic info.

• miRNA locus ID
• Cti-MIRN570

• miRNA locus accession
• PmiREN003442

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01077270.1  2403  2645  +

• Comments
• A member of family MIRN570

• Confidence level
• 

Secondary strurture and sequence

GAT      A  TAC  T   -    TG   CC         ATA   TGATCACCTGTGTTGGCACCTTCAGGCTTTTCAACTGTCAGGTCAACATCCAAAGGCTCAGAATCTCCAAACAACCC
   CTAGCA GT   AG CTT CGGT  GTT  TCATCATCA   TTC                                                                             
   |||||| ||   || ||| ||||  |||  |||||||||   |||                                                                             G
   GATCGT CA   TC GAA GTCA  CAA  AGTAGTAGT   TCA                                                                             
  T      -  CCA  -   C    --   TT         -CG   CCATTGAAGAAGTTTGGGTTGTCACTGTATCCCCTAGTCGGGGAGCTGTATCTCGTCGTGAACCTTCTACAGTACAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]