Cti-MIRN518b

Basic info.

• miRNA locus ID
• Cti-MIRN518b

• miRNA locus accession
• PmiREN003447

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01140485.1  2455  2581  +

• Comments
• A member of family MIRN518

• Confidence level
• 

Secondary strurture and sequence

TG    T     CG     A          G                   T  A  TTCTTAA
  ATGC TTAAT  ATACT TACCAAAGGA TATACATCGGATTCTTTTA GA TG       
  |||| |||||  ||||| |||||||||| ||||||||||||||||||| || ||        
  TGTG GGTTA  TATGA ATGGTTTCCT ATATGTGGCTTAAGAAAAT CT AC       
 A    T     TA     C          -                   T  A  TAATGTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]