Cti-MIRN575

Basic info.

• miRNA locus ID
• Cti-MIRN575

• miRNA locus accession
• PmiREN003449

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01158289.1  45  184  -

• Comments
• A member of family MIRN575

• Confidence level
• 

Secondary strurture and sequence

     T -           GGA G            CA  -----------    ATA G     -    A   CGGA
 CTCA C CGGTCAATAAA   G CTTTGATCGGTC  CC           ACTC   C GTGGA CGTG TCA    
 |||| | |||||||||||   | ||||||||||||  ||           ||||   | ||||| |||| |||     
 GAGT G GCCAGTTGTTT   C GAAACTGGCCAG  GG           TGGG   G TACTT GCGC AGT    
T    T A           ACG A            AG  GGAAATTATTA    -AG G     A    -   TAGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]