Cti-MIRN577

Basic info.

• miRNA locus ID
• Cti-MIRN577

• miRNA locus accession
• PmiREN003452

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01169150.1  862  1029  -

• Comments
• A member of family MIRN577

• Confidence level
• 

Secondary strurture and sequence

                 T                     T         G    C                     --    AAAA
  ATATAAGAACCAAGC CCTTGTATATATCAGCTAGCT GCGGAATTT TGTG TTTTCTTTGTGCGAGTTCTTT  TCTC    
  ||||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||  ||||    G
  TATATTCTTGGTTTG GGAACATATATAGTCGGTTGG CGCCTTAAA ACAC AAAGGAAACACGCTTAAGGAA  AGAG    
TA               T                     -         G    A                     GT    AATA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]