Cti-MIRN581a

Basic info.

• miRNA locus ID
• Cti-MIRN581a

• miRNA locus accession
• PmiREN003459

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01223849.1  4000  4133  -

• Comments
• A member of family MIRN581

• Confidence level
• 

Secondary strurture and sequence

     A          AC    A            CA          -   CACA    --   T    ATTA
   AC TAAGAAGTAT  GAAG TTGATGTGTTTG  GAATGACGAA ACG    AGAA  TCG GCCA    
   || ||||||||||  |||| ||||||||||||  |||||||||| |||    ||||  ||| ||||     
   TG ATTCTTCATA  CTTC AACTACACAAAC  TTTACTGTTT TGC    TCTT  AGT TGGT    
TTT  -          CA    A            -A          C   ----    AC   T    CTGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]