Cti-MIRN582

Basic info.

• miRNA locus ID
• Cti-MIRN582

• miRNA locus accession
• PmiREN003463

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01228797.1  23  196  -

• Comments
• A member of family MIRN582

• Confidence level
• 

Secondary strurture and sequence

                  A                    G C                             A         T     G
  GGGTAAATTGTACGAT TCTTTGAGCTGAACTAACAC A GACATGTATGTAATTAGGAGTAGCCTGCT GCTTCTTCG AATGC 
  |||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| ||||| A
  CCCATTTAACATGCTA AGAAACTTGGCTTGATTGTG T CTGTACATACATTAATCCTCATCGGACGA CGAAGGAGC TTACG 
GT                C                    G T                             C         -     G

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]