Cti-MIRN583

Basic info.

• miRNA locus ID
• Cti-MIRN583

• miRNA locus accession
• PmiREN003465

• Organism
• Carthamus tinctorius

• Genomic location
• Cti-LUCG01232711.1  3476  3728  +

• Comments
• A member of family MIRN583

• Confidence level
• 

Secondary strurture and sequence

A     CCT   -G     CATTT  CA  -   A       A  A -  - AAAAG  -  TACATTTACAGGAGCACGAATGGCTGCCATTTGTTTGAATAGATGAACAGAAGAAGAATAGTGCTTCATTTT
 CCGTC   AGT  CAAGA     GA  AC AAC CTTGATG CG T GT T     TG TA                                                                        
 |||||   |||  |||||     ||  || ||| ||||||| || | || |     || ||                                                                        T
 GGTAG   TCA  GTTTT     CT  TG TTG GAACTAC TA C GG G     GT GA                                                                        
A     -AT   AA     -----  AA  A   -       -  - G  A -----  T  CAAACTAGTTTACAGTGTTTGGGTTGGAGACGGAAGACAACAATTTAAGTGGGTCAACAACGTTCGGCAATG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Expression info.

Pri-miRNA expression [+]

Mature miRNA expression [+]

Target gene info.[+]